Birol Lab

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1. ntRoot ntRoot Public

   🌳 Scalable ancestry from genomic data

   Python 14 1

2. ntSynt ntSynt Public

   Detecting multi-genome synteny using minimizer graph mapping

   Python 116 2

3. goldrush goldrush Public

   Linear-time de novo Long Read Assembler

   C++ 43 2

4. ntEdit ntEdit Public

   ✏️ Genome assembly polishing & SNV detection

   C++ 74 10

5. AMPlify AMPlify Public

   Attentive deep learning model for antimicrobial peptide prediction

   Python 65 16

6. NanoSim NanoSim Public

   Nanopore sequence read simulator

   Python 311 65